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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*01:01-B*40:01-DRB1*03:01:01-DQB1*02:02 | USA South Dakota Lakota Sioux | 1.40 | 302 | 44_30_N_100_0_W |
| 2 | A*02:01-B*40:01 | USA North American Native | 1.10 | 187 | 30_0_N_95_0_W |
| 3 | A*02:01-B*40:01-C*03:04 | USA North American Native | 1.10 | 187 | 30_0_N_95_0_W |
| 4 | A*02:01-B*40:01-C*03:04-DRB1*04:01-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.18 | 5,926 | 38_45_N_76_6_W |
| 5 | A*02:01-B*40:01-C*03:04-DRB1*04:04-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.24 | 5,926 | 38_45_N_76_6_W |
| 6 | A*02:01-B*40:01-C*03:04-DRB1*04:04-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.20 | 1,376 | 38_45_N_76_6_W |
| 7 | A*02:01-B*40:01-C*03:04-DRB1*04:05-DQB1*02:01 | USA NMDP Alaska Native or Aleut | 0.20 | 1,376 | 38_45_N_76_6_W |
| 8 | A*02:01-B*40:01-C*03:04-DRB1*07:01-DQB1*02:01 | USA NMDP American Indian South or Central America | 0.13 | 5,926 | 38_45_N_76_6_W |
| 9 | A*02:01-B*40:01-C*03:04-DRB1*13:02-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.36 | 1,376 | 38_45_N_76_6_W |
| 10 | A*02:01-B*40:01-C*03:04-DRB1*13:02-DQB1*06:04 | USA NMDP American Indian South or Central America | 0.69 | 5,926 | 38_45_N_76_6_W |
| 11 | A*02:01-B*40:01-C*03:04-DRB1*13:02-DRB3*03:01-DQB1*06:04 | USA NMDP North American Amerindian | 0.62 | 35,791 | 38_45_N_76_6_W |
| 12 | A*02:01-B*40:01-C*03:04-DRB1*15:01-DQB1*06:02 | USA NMDP American Indian South or Central America | 0.15 | 5,926 | 38_45_N_76_6_W |
| 13 | A*02:06-B*40:01-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.21 | 1,376 | 38_45_N_76_6_W |
| 14 | A*02:06-B*40:01-DRB1*14:02-DQB1*03:01 | USA South Dakota Lakota Sioux | 2.90 | 302 | 44_30_N_100_0_W |
| 15 | A*11:01-B*40:01-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 16 | A*24:02:01-B*40:01:05-C*05:01:01-DRB1*03:01:01-DQB1*02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 17 | A*24:02-B*40:01 | USA Alaska Yupik | 1.00 | 252 | 60_48_N_161_26_W |
| 18 | A*24:02-B*40:01 | USA North American Native | 1.70 | 187 | 30_0_N_95_0_W |
| 19 | A*24:02-B*40:01-C*03:04-DRB1*04:04-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.13 | 5,926 | 38_45_N_76_6_W |
| 20 | A*24:02-B*40:01-C*03:04-DRB1*12:01-DQB1*03:01 | USA NMDP Caribean Indian | 0.16 | 14,339 | 38_45_N_76_6_W |
| 21 | A*24:02-B*40:01-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.72 | 1,376 | 38_45_N_76_6_W |
| 22 | A*31:01-B*40:01-C*03:04-DRB1*04:04-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.41 | 5,926 | 38_45_N_76_6_W |
| 23 | A*68:01:02-B*40:01:01-C*07:02:01-DRB1*04:04:01 | Costa Rica Amerindians (G) | 0.41 | 125 | 9_34_N_83_25_W |
| 24 | A*68:01-B*40:01-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.34 | 1,376 | 38_45_N_76_6_W |
| 25 | B*40:01-C*03:04 | USA North American Native | 3.70 | 187 | 30_0_N_95_0_W |
| 26 | B*40:01-C*03:04 | USA Alaska Yupik | 1.10 | 252 | 60_48_N_161_26_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net